dc.contributor.author
Holtgrewe, Manuel
dc.date.accessioned
2018-06-08T07:46:43Z
dc.date.available
2010-09-29
dc.identifier.uri
https://refubium.fu-berlin.de/handle/fub188/18686
dc.identifier.uri
http://dx.doi.org/10.17169/refubium-22374
dc.description.abstract
We present a read simulator software for Illumina, 454 and Sanger reads. Its
features include position specific error rates and base quality values. For
Illumina reads, we give a comprehensive analysis with empirical data for the
error and quality model. For the other technologies, we use models from the
literature. It has been written with performance in mind and can sample reads
from large genomes. The C++ source code is extensible, and freely available
under the GPL/LGPL.
de
dc.relation.ispartofseries
urn:nbn:de:kobv:188-fudocsseries000000000021-2
dc.rights.uri
http://www.fu-berlin.de/sites/refubium/rechtliches/Nutzungsbedingungen
dc.subject
second generation sequencing
dc.subject.ddc
000 Informatik, Informationswissenschaft, allgemeine Werke::000 Informatik, Wissen, Systeme::005 Computerprogrammierung, Programme, Daten
dc.title.subtitle
a read simulator for second generation sequencing data
refubium.affiliation
Mathematik und Informatik
de
refubium.affiliation.other
Institut für Informatik
refubium.mycore.fudocsId
FUDOCS_document_000000006687
refubium.series.name
Freie Universität Berlin, Fachbereich Mathematik und Informatik
refubium.series.reportNumber
10-6
refubium.mycore.derivateId
FUDOCS_derivate_000000001237
dcterms.accessRights.openaire
open access
