dc.contributor.author
Fritz, Franziska
dc.contributor.author
Preissner, Robert
dc.contributor.author
Banerjee, Priyanka
dc.date.accessioned
2023-01-18T08:56:49Z
dc.date.available
2023-01-18T08:56:49Z
dc.identifier.uri
https://refubium.fu-berlin.de/handle/fub188/37646
dc.identifier.uri
http://dx.doi.org/10.17169/refubium-37361
dc.description.abstract
Taste is one of the crucial organoleptic properties involved in the perception of food by humans. Taste of a chemical compound present in food stimulates us to take in food and avoid poisons. Bitter taste of drugs presents compliance problems and early flagging of potential bitterness of a drug candidate may help with its further development. Similarly, the taste of chemicals present in food is important for evaluation of food quality in the industry. In this work, we have implemented machine learning models to predict three different taste endpoints-sweet, bitter and sour. The VirtualTaste models achieved an overall accuracy of 90% and an AUC of 0.98 in 10-fold cross-validation and in an independent test set. The web server takes a two-dimensional chemical structure as input and reports the chemical's taste profile for three tastes-using molecular fingerprints along with confidence scores, including information on similar compounds with known activity from the training set and an overall radar chart. Additionally, insights into 25 bitter receptors are also provided via target prediction for the predicted bitter compounds. VirtualTaste, to the best of our knowledge, is the first freely available web-based platform for the prediction of three different tastes of compounds. It is accessible via http://virtualtaste.charite.de/VirtualTaste/without any login requirements and is free to use.
en
dc.rights.uri
https://creativecommons.org/licenses/by-nc/4.0/
dc.subject
Pharmaceutical Preparations
en
dc.subject
Machine Learning
en
dc.subject
Receptors, Cell Surface
en
dc.subject.ddc
600 Technik, Medizin, angewandte Wissenschaften::610 Medizin und Gesundheit::610 Medizin und Gesundheit
dc.title
VirtualTaste: a web server for the prediction of organoleptic properties of chemical compounds
dc.type
Wissenschaftlicher Artikel
dcterms.bibliographicCitation.doi
10.1093/nar/gkab292
dcterms.bibliographicCitation.journaltitle
Nucleic Acids Research
dcterms.bibliographicCitation.number
W1
dcterms.bibliographicCitation.originalpublishername
Oxford University Press (OUP)
dcterms.bibliographicCitation.pagestart
W679
dcterms.bibliographicCitation.pageend
W684
dcterms.bibliographicCitation.volume
49
refubium.affiliation
Charité - Universitätsmedizin Berlin
refubium.resourceType.isindependentpub
no
dcterms.accessRights.openaire
open access
dcterms.bibliographicCitation.pmid
33905509
dcterms.isPartOf.eissn
1362-4962