dc.contributor.author
Gruenstaeudl, Michael
dc.contributor.author
Hartmaring, Yannick
dc.date.accessioned
2019-03-01T20:54:00Z
dc.date.available
2019-03-01T20:54:00Z
dc.identifier.uri
https://refubium.fu-berlin.de/handle/fub188/24018
dc.identifier.uri
http://dx.doi.org/10.17169/refubium-1793
dc.description.abstract
The submission of DNA sequences to public sequence databases is an essential, but insufficiently automated step in the process of generating and disseminating novel DNA sequence data. Despite the centrality of database submissions to biological research, the range of available software tools that facilitate the preparation of sequence data for database submissions is low, especially for sequences generated via plant and fungal DNA barcoding. Current submission procedures can be complex and prohibitively time expensive for any but a small number of input sequences. A user-friendly software tool is needed that streamlines the file preparation for database submissions of DNA sequences that are commonly generated in plant and fungal DNA barcoding.
en
dc.format.extent
20 Seiten
dc.rights.uri
https://creativecommons.org/licenses/by/4.0/
dc.subject
Sequence databases
en
dc.subject
DNA barcoding
en
dc.subject
Data processing
en
dc.subject
Software tools
en
dc.subject
Software design
en
dc.subject
Computer software
en
dc.subject
Plant genetics
en
dc.subject.ddc
500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::576 Genetik und Evolution
dc.title
EMBL2checklists: A Python package to facilitate the user-friendly submission of plant and fungal DNA barcoding sequences to ENA
dc.type
Wissenschaftlicher Artikel
dcterms.bibliographicCitation.journaltitle
PLoS ONE
dcterms.bibliographicCitation.number
1
dcterms.bibliographicCitation.volume
14
dcterms.bibliographicCitation.url
https://doi.org/10.1371/journal.pone.0210347
refubium.affiliation
Biologie, Chemie, Pharmazie
refubium.funding
Institutional Participation
refubium.funding.id
Plos One
refubium.resourceType.isindependentpub
no
dcterms.accessRights.openaire
open access
